Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10089899 chr8:55459190 G/A 0 118 4.13 27.07 49.4 KM Plot
THYM rs1010136 chr4:12514599 G/C 9.42E-7 119 38.33 57.27 12.78 KM Plot
THYM rs10114295 chr9:97242721 G/A 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs10115864 chr9:97147026 A/C 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs10116979 chr9:97259714 A/G 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs10117801 chr9:97239385 C/A 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs10121083 chr9:98526008 C/T 6.65E-7 119 32.45 51.53 38.23 KM Plot
THYM rs10121612 chr9:15296852 A/C 0.000231 114 49.6 35.13 35.42 KM Plot
THYM rs10122398 chr9:97174159 C/G 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs10122626 chr9:133995333 G/A 8.51E-5 118 39.75 44.58 12.75 KM Plot
THYM rs10125631 chr9:97249031 T/C 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs10125744 chr9:97171337 G/A 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs10130790 chr14:78324192 G/A 1.23E-5 119 22.5 50.1 37.63 KM Plot
THYM rs1013397 chr4:143375877 G/A 0.000185 119 38.33 46.43 18.42 KM Plot
THYM rs10145548 chr14:80405632 G/A 1.36E-6 118 9.85 38.58 42.82 KM Plot